Year 2009 - Issue 2 - March-April
Calcolo Scientifico nella Fisica Italiana - CSFI 2008

Comparative Genome Viewer
Authors: I. Molineris, G. Sales
DOI: 10.1393/ncc/i2009-10406-8
pp. 289-292
Published online 25 September 2009
Download fulltext

The PROMETEO Code: A flexible tool for Free Electron Laser study
Authors: G. Dattoli, P. L. Ottaviani, S. Pagnutti
DOI: 10.1393/ncc/i2009-10419-3
pp. 283-287
Published online 9 October 2009
Download fulltext

Data management technologies in LHC Computing Grid
Authors: R. Zappi
DOI: 10.1393/ncc/i2009-10403-y
pp. 279-282
Published online 18 September 2009
Download fulltext

StoRM: A Manager for Storage Resource in Grid
Authors: A. Ghiselli, L. Magnoni, R. Zappi
DOI: 10.1393/ncc/i2009-10408-6
pp. 273-277
Published online 28 September 2009
Download fulltext

Computer simulations of the theory of strong interactions
Authors: N. Tantalo
DOI: 10.1393/ncc/i2009-10417-5
pp. 267-271
Published online 9 October 2009
Download fulltext

High-order integration schemes for Particle In Cell (PIC) method
Authors: A. Sgattoni, P. Londrillo, C. Benedetti, G. Turchetti
DOI: 10.1393/ncc/i2009-10418-4
pp. 261-266
Published online 9 October 2009
Download fulltext

Computational aspects of scalar dispersion modeling and simulation in complex flows
Authors: R. Rossi, G. Iaccarino
DOI: 10.1393/ncc/i2009-10405-9
pp. 257-260
Published online 25 September 2009
Download fulltext

The computing of the LHC experiments
Authors: M. Paganoni
DOI: 10.1393/ncc/i2009-10438-0
pp. 253-256
Published online 23 October 2009
Download fulltext

A HPC and Grid enabling framework for genetic linkage analysis of SNPs
Authors: L. Milanesi, A. Calabria, D. Di Pasquale, M. Gnocchi, A. Orro, G. Trombetti
DOI: 10.1393/ncc/i2009-10414-8
pp. 249-252
Published online 6 October 2009
Download fulltext

Storage Infrastructure at the INFN LHC Tier-1
Authors: A. Cavalli, L. dell'Agnello, D. Gregori, L. Magnoni, B. Martelli, G. Peco, A. Prosperini, P. P. Ricci, E. Ronchieri, V. Sapunenko, V. Vagnoni, R. Zappi
DOI: 10.1393/ncc/i2009-10413-9
pp. 243-247
Published online 6 October 2009
Download fulltext

Grid: From EGEE to EGI and from INFN-GRID to IGI
Authors: A. Ghiselli, M. Mazzucato
DOI: 10.1393/ncc/i2009-10444-2
pp. 233-241
Published online 29 October 2009
Download fulltext

Structural predictions of biomolecular systems
Authors: F. Fogolari
DOI: 10.1393/ncc/i2009-10395-6
pp. 227-231
Published online 7 September 2009
Download fulltext

Measuring performances of linux hypervisors
Authors: A. Chierici, R. Veraldi, D. Salomoni
DOI: 10.1393/ncc/i2009-10391-x
pp. 213-225
Published online 4 September 2009
Download fulltext

The gLite Workload Management System
Authors: M. Cecchi, F. Capannini, A. Dorigo, A. Ghiselli, F. Giacomini, A. Maraschini, M. Marzolla, S. Monforte, F. Pacini, L. Petronzio, M. Sgaravatto
DOI: 10.1393/ncc/i2009-10412-x
pp. 209-212
Published online 6 October 2009
Download fulltext

The evolution of the Italian Research and Education Network
Authors: M. Carboni
DOI: 10.1393/ncc/i2009-10416-6
pp. 205-208
Published online 9 October 2009
Download fulltext

LHCb distributed data analysis
Authors: A. Carbone, S. Perazzini
DOI: 10.1393/ncc/i2009-10387-6
pp. 201-204
Published online 4 September 2009
Download fulltext

Application of the Post-Widder Laplace inversion algorithm to postseismic rebound models
Authors: V. Cannelli, D. Melini, A. Piersanti, G. Spada
DOI: 10.1393/ncc/i2009-10392-9
pp. 197-200
Published online 4 September 2009
Download fulltext

Parameter study in disk-jet systems: Magnetization
Authors: P. Tzeferacos, A. Ferrari, A. Mignone, C. Zanni, G. Bodo, S. Massaglia
DOI: 10.1393/ncc/i2009-10393-8
pp. 193-196
Published online 4 September 2009
Download fulltext

YSO jets: MHD simulations with radiative cooling
Authors: O. Teşileanu, A. Mignone, S. Massaglia
DOI: 10.1393/ncc/i2009-10397-4
pp. 187-191
Published online 7 September 2009
Download fulltext

A possible solution for dinamically managing virtual environments
Authors: M. R. Cefalà, M. Mariotti, L. Servoli
DOI: 10.1393/ncc/i2009-10401-1
pp. 179-185
Published online 16 September 2009
Download fulltext

Development of a tool to optimize the performance of a Maui Cluster Scheduler
Authors: F. Cantini, M. Mariotti, L. Servoli, C. Tanci
DOI: 10.1393/ncc/i2009-10402-0
pp. 173-178
Published online 16 September 2009
Download fulltext

Covariant self-fields regularization in dense electron beams
Authors: M. Quattromini, L. Giannessi
DOI: 10.1393/ncc/i2009-10407-7
pp. 169-172
Published online 28 September 2009
Download fulltext

A distributed approach for parameter estimation in Systems Biology models
Authors: E. Mosca, I. Merelli, R. Alfieri, L. Milanesi
DOI: 10.1393/ncc/i2009-10400-2
pp. 165-168
Published online 11 September 2009
Download fulltext

A Vlasov solver for collective effects in particle accelerators
Authors: M. Migliorati, G. Dattoli, A. Schiavi, M. Venturini
DOI: 10.1393/ncc/i2009-10394-7
pp. 161-164
Published online 7 September 2009
Download fulltext

Networks in biological systems: An investigation of the Gene Ontology as an evolving network
Authors: C. Coronnello, M. Tumminello, S. Miccichè, R. N. Mantegna
DOI: 10.1393/ncc/i2009-10386-7
pp. 157-160
Published online 4 September 2009
Download fulltext

Highlights from particle-in-cell simulations of superintense laser-plasma interactions
Authors: A. Macchi, A. Bigongiari, T. V. Liseikina
DOI: 10.1393/ncc/i2009-10380-1
pp. 153-156
Published online 1 September 2009
Download fulltext

Development of a Particle-In-Cell code with Structured Adaptive Mesh Refinement for Plasma Focus devices breakdown simulation
Authors: G. Grasso, F. Rocchi, M. Sumini
DOI: 10.1393/ncc/i2009-10390-y
pp. 147-151
Published online 4 September 2009
Download fulltext

Simulating the formation and evolution of galaxies with EvoL, the Padova $N$-body Tree-SPH Code
Authors: E. Merlin, C. Chiosi, T. Grassi, U. Buonomo, S. Chinellato
DOI: 10.1393/ncc/i2009-10445-1
pp. 143-146
Published online 29 October 2009
Download fulltext

Hydrogen storage in $MgH_2$ matrices: A study of $Mg-MgH_2$ interface using CPMD code on ENEA-GRID
Authors: S. Giusepponi, M. Celino, F. Cleri, A. Montone
DOI: 10.1393/ncc/i2009-10398-3
pp. 139-142
Published online 9 September 2009
Download fulltext

Software trigger systems in High Energy Physics
Authors: D. Galli
DOI: 10.1393/ncc/i2009-10378-7
pp. 129-137
Published online 1 September 2009
Download fulltext

Present and future of one of the largest Grid infrastructures in Europe
Authors: L. Carota, T. Ferrari, L. Gaido, F. Nebiolo
DOI: 10.1393/ncc/i2009-10381-0
pp. 125-127
Published online 1 September 2009
Download fulltext

Mass production of event simulations for the BaBar experiment using the Grid
Authors: A. Fella, D. Andreotti, E. Luppi, L. Li Gioi
DOI: 10.1393/ncc/i2009-10389-4
pp. 121-124
Published online 4 September 2009
Download fulltext

The Grid-distributed data analysis in CMS
Authors: F. Fanzago, F. Farina, M. Cinquilli, G. Codispoti, F. Fanfani, S. Lacaprara, E. Miccio, S. Spiga, E. Vaandering
DOI: 10.1393/ncc/i2009-10399-2
pp. 115-119
Published online 10 September 2009
Download fulltext

The ECHO code for astrophysical plasmas: Special and General Relativistic MHD
Authors: L. Del Zanna, S. Landi, O. Zanotti, N. Bucciantini, P. Londrillo
DOI: 10.1393/ncc/i2009-10385-8
pp. 109-113
Published online 3 September 2009
Download fulltext

The Distrimobs approach for parallelization of pedestrian mobility computations
Authors: M. Brambilla, L. Cattelani
DOI: 10.1393/ncc/i2009-10384-9
pp. 105-108
Published online 3 September 2009
Download fulltext

Cloud computing and RESERVOIR project
Authors: S. Beco, A. Maraschini, F. Pacini, O. Biran, D. Breitgand, K. Meth, B. Rochwerger, E. Salant, E. Silvera, S. Tal, Y. Wolfsthal, M. B. Yehuda, J. Cáceres, J. Hierro, W. Emmerich, A. Galis, L. Edblom, E. Elmroth, D. Henriksson, F. Hernandez, J. Tordsson, A. Hohl, E. Levy, A. Sampaio, B. Scheuermann, M. Wusthoff, J. Latanicki, G. Lopez, J. Marin-Frisonroche, A. Dőrr, F. Ferstl, E. Huedo, I. Llorente, R. Montero, P. Massonet, S. Naqvi, G. Dallons, M. Pezz, A. Puliafito, C. Ragusa, M. Scarpa, S. Muscella
DOI: 10.1393/ncc/i2009-10388-5
pp. 99-103
Published online 7 September 2009
Download fulltext

European actions for High-Performance Computing: PRACE, DEISA and HPC-Europa
Authors: S. Bassini, C. Cavazzoni, C. Gheller
DOI: 10.1393/ncc/i2009-10409-5
pp. 93-97
Published online 30 September 2009
Download fulltext

Unsteady interactional aerodynamics of a helicopter configuration
Authors: M. Biava
DOI: 10.1393/ncc/i2009-10383-x
pp. 89-92
Published online 3 September 2009
Download fulltext

Fluid dynamic analysis of a Ranque-Hilsch vortex tube
Authors: A. Secchiaroli, R. Ricci, S. Montelpare, V. D'Alessandro
DOI: 10.1393/ncc/i2009-10375-x
pp. 85-88
Published online 6 August 2009
Download fulltext

Simulations of a turbulent channel flow with rodlike polymers
Authors: E. De Angelis, E. S. C. Ching
DOI: 10.1393/ncc/i2009-10404-x
pp. 81-84
Published online 28 September 2009
Download fulltext

Computational modeling of local hemodynamics phenomena: Methods, tools and clinical applications
Authors: R. Ponzini, G. Rizzo, C. Vergara, A. Veneziani, U. Morbiducci, F. M. Montevecchi, A. Redaelli
DOI: 10.1393/ncc/i2009-10376-9
pp. 77-80
Published online 6 August 2009
Download fulltext

Excited-state properties calculations: Applications to biological systems
Authors: A. Mosca Conte, V. Garbuio, M. Marsili, E. Ippoliti, R. Del Sole, P. Carloni, O. Pulci
DOI: 10.1393/ncc/i2009-10377-8
pp. 73-76
Published online 1 September 2009
Download fulltext

Drug design: Insights from atomistic simulations
Authors: F. Collu, E. Spiga, A. Kumar, E. Hajjar, A. V. Vargiu, M. Ceccarelli, P. Ruggerone
DOI: 10.1393/ncc/i2009-10365-0
pp. 67-71
Published online 3 August 2009
Download fulltext

A simple asynchronous replica-exchange implementation
Authors: Giovanni Bussi
DOI: 10.1393/ncc/i2009-10369-8
pp. 61-65
Published online 3 August 2009
Download fulltext

Computational challenges about nanostructures and biosystems at surfaces
Authors: R. Di Felice, S. Corni, E. Molinari
DOI: 10.1393/ncc/i2009-10370-3
pp. 57-60
Published online 4 August 2009
Download fulltext

Multiphase lattice Boltzmann on the Cell Broadband Engine
Authors: F. Belletti, L. Biferale, F. Mantovani, S. F. Schifano, F. Toschi, R. Tripiccione
DOI: 10.1393/ncc/i2009-10379-6
pp. 53-56
Published online 1 September 2009
Download fulltext

Large-scale computing with Quantum ESPRESSO
Authors: P. Giannozzi, C. Cavazzoni
DOI: 10.1393/ncc/i2009-10368-9
pp. 49-52
Published online 3 August 2009
Download fulltext

Modeling SNR shock waves expanding through the magnetized inhomogeneous interstellar medium
Authors: S. Orlando, F. Bocchino, M. Miceli, F. Reale, G. Peres
DOI: 10.1393/ncc/i2009-10367-x
pp. 45-48
Published online 3 August 2009
Download fulltext

Three-dimensional magnetic reconnection simulations using the Eulerian Conservative High Order (ECHO) code
Authors: S. Landi, P. Londrillo, L. Del Zanna, M. Velli
DOI: 10.1393/ncc/i2009-10364-1
pp. 41-44
Published online 3 August 2009
Download fulltext

The PLUTO code for astrophysical gas dynamics
Authors: A. Mignone
DOI: 10.1393/ncc/i2009-10382-y
pp. 37-40
Published online 3 September 2009
Download fulltext

High-performance computing for classic gravitational $N$-body systems
Authors: R. Capuzzo-Dolcetta
DOI: 10.1393/ncc/i2009-10374-y
pp. 33-36
Published online 6 August 2009
Download fulltext

HPC, grid and data infrastructures for astrophysics: An integrated view
Authors: F. Pasian
DOI: 10.1393/ncc/i2009-10372-1
pp. 29-32
Published online 6 August 2009
Download fulltext

Computational challenges in high-energy astrophysics
Authors: A. Ferrari
DOI: 10.1393/ncc/i2009-10371-2
pp. 23-28
Published online 6 August 2009
Download fulltext

Network approaches to Genome-Wide Association studies
Authors: D. Remondini, E. Verondini, F. Lescai, I. Zironi, G. Castellani
DOI: 10.1393/ncc/i2009-10366-y
pp. 19-22
Published online 3 August 2009
Download fulltext

Large-scale modelling of neuronal systems
Authors: G. Castellani, E. Verondini, E. Giampieri, L. Milanesi, F. Bersani, I. Zironi, D. Remondini
DOI: 10.1393/ncc/i2009-10396-5
pp. 13-18
Published online 7 September 2009
Download fulltext

Protein folding: Can high-performance computing improve our understanding?
Authors: G. Tiana
DOI: 10.1393/ncc/i2009-10363-2
pp. 9-12
Published online 3 August 2009
Download fulltext

An application of parallel computing to the simulation of volcanic eruptions
Authors: A. Neri, T. Esposti Ongaro, L. Nannipieri, C. Cavazzoni, G. Erbacci
DOI: 10.1393/ncc/i2009-10373-0
pp. 5-8
Published online 6 August 2009
Download fulltext

HPC in global geodynamics: Advances in normal-mode analytical modeling
Authors: D. Melini
DOI: 10.1393/ncc/i2009-10362-3
pp. 1-4
Published online 3 August 2009
Download fulltext